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bioconda / packages / bioconductor-dmrcaller 1.38.0

Differentially Methylated Regions caller

Installers

Info: This package contains files in non-standard labels.
  • linux-aarch64 v1.34.0
  • linux-64 v1.38.0
  • osx-64 v1.38.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-dmrcaller
conda install bioconda/label/gcc7::bioconductor-dmrcaller

Description

Uses Bisulfite sequencing data in two conditions and identifies differentially methylated regions between the conditions in CG and non-CG context. The input is the CX report files produced by Bismark and the output is a list of DMRs stored as GRanges objects.

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