bioconda / packages / bioconductor-dmrcaller 1.20.0

Differentially Methylated Regions caller

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.20.0
  • osx-64  v1.20.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-dmrcaller
conda install -c bioconda/label/gcc7 bioconductor-dmrcaller

Description

Uses Bisulfite sequencing data in two conditions and identifies differentially methylated regions between the conditions in CG and non-CG context. The input is the CX report files produced by Bismark and the output is a list of DMRs stored as GRanges objects.

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