bioconda / packages / bioconductor-diffhic 1.20.0

Differential Analyis of Hi-C Data

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.20.0
  • osx-64  v1.20.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-diffhic
conda install -c bioconda/label/gcc7 bioconductor-diffhic

Description

Detects differential interactions across biological conditions in a Hi-C experiment. Methods are provided for read alignment and data pre-processing into interaction counts. Statistical analysis is based on edgeR and supports normalization and filtering. Several visualization options are also available.

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