• License: GPL-3
• Home: https://bioconductor.org/packages/3.20/bioc/html/diffHic.html
• 29402 total downloads
• Last upload: 29 days and 5 hours ago

Description

Detects differential interactions across biological conditions in a Hi-C experiment. Methods are provided for read alignment and data pre-processing into interaction counts. Statistical analysis is based on edgeR and supports normalization and filtering. Several visualization options are also available.