• License: GPL-3
• Home: https://bioconductor.org/packages/3.18/bioc/html/diffHic.html
• 28531 total downloads
• Last upload: 6 months and 22 days ago

Description

Detects differential interactions across biological conditions in a Hi-C experiment. Methods are provided for read alignment and data pre-processing into interaction counts. Statistical analysis is based on edgeR and supports normalization and filtering. Several visualization options are also available.