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bioconductor-cytoviewer

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An interactive multi-channel image viewer for R

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-cytoviewer

Usage Tracking

1.6.0
1.2.0
1.0.0
3 / 8 versions selected
Downloads (Last 6 months): 0

Description

This R package supports interactive visualization of multi-channel images and segmentation masks generated by imaging mass cytometry and other highly multiplexed imaging techniques using shiny. The cytoviewer interface is divided into image-level (Composite and Channels) and cell-level visualization (Masks). It allows users to overlay individual images with segmentation masks, integrates well with SingleCellExperiment and SpatialExperiment objects for metadata visualization and supports image downloads.

About

Summary

An interactive multi-channel image viewer for R

Last Updated

Dec 22, 2024 at 23:11

License

GPL-3

Total Downloads

3.0K

Supported Platforms

noarch