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bioconda / packages / bioconductor-copyhelper 1.38.0

Helper files for CopywriteR

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.38.0
  • osx-64 v1.12.0
  • linux-64 v1.12.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-copyhelper
conda install bioconda/label/cf201901::bioconductor-copyhelper
conda install bioconda/label/gcc7::bioconductor-copyhelper

Description

This package contains the helper files that are required to run the Bioconductor package CopywriteR. It contains pre-assembled 1kb bin GC-content and mappability files for the reference genomes hg18, hg19, hg38, mm9 and mm10. In addition, it contains a blacklist filter to remove regions that display CNV. Files are stored as GRanges objects from the GenomicRanges Bioconductor package.

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