bioconductor-cohcap
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
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Description
COHCAP (pronounced "co-cap") provides a pipeline to analyze single-nucleotide resolution methylation data (Illumina 450k/EPIC methylation array, targeted BS-Seq, etc.). It provides differential methylation for CpG Sites, differential methylation for CpG Islands, integration with gene expression data, with visualizaton options. Discussion Group: https://sourceforge.net/p/cohcap/discussion/bioconductor/
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Summary
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
Last Updated
Dec 6, 2023 at 11:06
License
GPL-3
Total Downloads
44.6K
Supported Platforms
linux-64
macOS-64
linux-aarch64