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bioconductor-bulksignalr

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Infer Ligand-Receptor Interactions from bulk expression (transcriptomics/proteomics) data, or spatial transcriptomics

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-bulksignalr

Usage Tracking

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Description

Inference of ligand-receptor (LR) interactions from bulk expression (transcriptomics/proteomics) data, or spatial transcriptomics. BulkSignalR bases its inferences on the LRdb database included in our other package, SingleCellSignalR available from Bioconductor. It relies on a statistical model that is specific to bulk data sets. Different visualization and data summary functions are proposed to help navigating prediction results.

About

Summary

Infer Ligand-Receptor Interactions from bulk expression (transcriptomics/proteomics) data, or spatial transcriptomics

Last Updated

Mar 6, 2026 at 18:47

License

CeCILL | file LICENSE

Supported Platforms

noarch