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bioconda / packages / bioconductor-bnem 1.10.0

Training of logical models from indirect measurements of perturbation experiments

Installers

  • noarch v1.10.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-bnem

Description

bnem combines the use of indirect measurements of Nested Effects Models (package mnem) with the Boolean networks of CellNOptR. Perturbation experiments of signalling nodes in cells are analysed for their effect on the global gene expression profile. Those profiles give evidence for the Boolean regulation of down-stream nodes in the network, e.g., whether two parents activate their child independently (OR-gate) or jointly (AND-gate).


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