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atlas-metadata-validator

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A MAGE-TAB validator for Expression Atlas and Single Cell Expression Atlas

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::atlas-metadata-validator

Usage Tracking

1.6.1
1.6.0
1.5.0
1.4.1
1.4.0
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Total downloads: 0

Description

This is a python module to parse a set of MAGE-TAB files and check for compatibility with the Expression Atlas and Single Cell Expression Atlas analysis pipelines. The main validation script automatically detects the experiment type from the MAGE-TAB and runs the respective tests. Currently general checks (for bulk and single-cell experiment) as well as Single Cell Expression Atlas specific checks are supported.

About

Summary

A MAGE-TAB validator for Expression Atlas and Single Cell Expression Atlas

Information Last Updated

Apr 22, 2025 at 15:29

License

Apache Software

Total Downloads

23.5K

Platforms

noarch Version: 1.6.1