bioconda / packages / atlas-metadata-validator 1.3.0

A MAGE-TAB validator for Expression Atlas and Single Cell Expression Atlas

Installers

conda install

  • noarch  v1.3.0
To install this package with conda run:
conda install -c bioconda atlas-metadata-validator

Description

This is a python module to parse a set of MAGE-TAB files and check for compatibility with the Expression Atlas and Single Cell Expression Atlas analysis pipelines. The main validation script automatically detects the experiment type from the MAGE-TAB and runs the respective tests. Currently general checks (for bulk and single-cell experiment) as well as Single Cell Expression Atlas specific checks are supported.

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