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assembly_uploader

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Python scripts to upload primary metagenome and metatranscriptome assemblies to ENA on a per-study basis. The scripts generate xmls to register a new study and create manifests necessary for submission with webin-cli.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::assembly_uploader

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Usage Tracking

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About

Summary

Python scripts to upload primary metagenome and metatranscriptome assemblies to ENA on a per-study basis. The scripts generate xmls to register a new study and create manifests necessary for submission with webin-cli.

Last Updated

Oct 12, 2026 at 13:31

License

Apache-2.0

Supported Platforms

noarch