|
perl-capture-tiny
|
public |
Capture STDOUT and STDERR from Perl, XS or external programs
|
2023-06-16 |
|
perl-params-util
|
public |
Simple, compact and correct param-checking functions
|
2023-06-16 |
|
perl-spreadsheet-parseexcel
|
public |
Read information from an Excel file.
|
2023-06-16 |
|
perl-graph
|
public |
a Perl extension for keeping data partially sorted
|
2023-06-16 |
|
perl-aceperl
|
public |
Object-Oriented Access to ACEDB Databases
|
2023-06-16 |
|
db
|
public |
The Berkeley Database (BDB) embedded, key-value database
|
2023-06-16 |
|
gdbm
|
public |
GNU dbm library of database functions
|
2023-06-16 |
|
expat
|
public |
XML parser library written in C
|
2023-06-16 |
|
muscle
|
public |
High-performance multiple sequence alignment tool
|
2023-06-16 |
|
jemalloc
|
public |
No Summary
|
2023-06-16 |
|
perl-algorithm-diff
|
public |
Compute `intelligent' differences between two files / lists but use the old (<=0.59) interface.
|
2023-06-16 |
|
tbb
|
public |
No Summary
|
2023-06-16 |
|
perl-tie-cache
|
public |
LRU Cache in Memory
|
2023-06-16 |
|
perl-swiss-knife
|
public |
No Summary
|
2023-06-16 |
|
boost
|
public |
Boost C++ Libraries - headers and static libraries
|
2023-06-16 |
|
r-dplyr
|
public |
No Summary
|
2023-06-16 |
|
r-scales
|
public |
No Summary
|
2023-06-16 |
|
r-ggplot2
|
public |
No Summary
|
2023-06-16 |
|
biobuilds
|
public |
No Summary
|
2023-06-16 |
|
trinity
|
public |
De-novo transcriptome assembly from Illumina RNA-Seq data
|
2023-06-16 |
|
tophat
|
public |
Fast splice junction mapper for RNA-Seq reads
|
2023-06-16 |
|
blast
|
public |
No Summary
|
2023-06-16 |
|
rsem
|
public |
Accurate quantification of gene and isoform expression from RNA-Seq data
|
2023-06-16 |
|
barracuda
|
public |
GPU-accelerated implementation of the BWA short read aligner
|
2023-06-16 |
|
biopython
|
public |
No Summary
|
2023-06-16 |
|
htseq
|
public |
Framework for processing and analyzing data from high-throughput sequencing assays
|
2023-06-16 |
|
soap3-dp
|
public |
Ultra-fast, GPU-accelerated tool for short read alignment
|
2023-06-16 |
|
bwa
|
public |
No Summary
|
2023-06-16 |
|
picard
|
public |
No Summary
|
2023-06-16 |
|
fastqc
|
public |
Java quality control application for high throughput sequence data
|
2023-06-16 |
|
igv
|
public |
No Summary
|
2023-06-16 |
|
variant_tools
|
public |
Integrated annotation and analysis package for next-generation sequencing data
|
2023-06-16 |
|
bamtools
|
public |
No Summary
|
2023-06-16 |
|
star
|
public |
Ultrafast, universal RNA-seq aligner
|
2023-06-16 |
|
pysam
|
public |
Python module for reading and manipulating samfiles
|
2023-06-16 |
|
openblas
|
public |
No Summary
|
2023-06-16 |
|
htslib
|
public |
No Summary
|
2023-06-16 |
|
veclib-headers
|
public |
Vector intrinsics for IBM POWER architecture
|
2023-06-16 |
|
samtools
|
public |
No Summary
|
2023-06-16 |
|
graphviz
|
public |
Graph Visualization Software
|
2023-06-16 |
|
libgd
|
public |
Library for the dynamic creation of images
|
2023-06-16 |
|
allpathslg
|
public |
Whole genome shotgun assembler that can generate high quality assemblies from short reads
|
2023-06-16 |
|
emboss
|
public |
Open Source software suite for molecular biology
|
2023-06-16 |
|
perl-gd
|
public |
Perl interface to the GD graphics library
|
2023-06-16 |
|
gnuplot
|
public |
No Summary
|
2023-06-16 |
|
ncbi-ngs-sdk
|
public |
NCBI API and language bindings for accessing NGS data (C++ bindings only)
|
2023-06-16 |
|
sra-tools
|
public |
Collection of tools and libraries for accessing the NCBI Sequence Read Archive (SRA)
|
2023-06-16 |
|
libmagic
|
public |
File type guesser (library and binary)
|
2023-06-16 |
|
hdf5
|
public |
Data model, library, and file format for storing and managing data
|
2023-06-16 |
|
fastx-toolkit
|
public |
Command line tools for short-read FASTA & FASTQ file preprocessing
|
2023-06-16 |
