|
fastqc
|
public |
Java quality control application for high throughput sequence data
|
2025-03-25 |
|
picard
|
public |
No Summary
|
2025-03-25 |
|
fasta
|
public |
Biological sequence alignment tool
|
2025-03-25 |
|
bamtools
|
public |
No Summary
|
2025-03-25 |
|
tophat
|
public |
Fast splice junction mapper for RNA-Seq reads
|
2025-03-25 |
|
cufflinks
|
public |
Transcriptome assembly and differential expression analysis for RNA-Seq
|
2025-03-25 |
|
boost
|
public |
Boost C++ Libraries - headers and static libraries
|
2025-03-25 |
|
icu
|
public |
Libraries for Unicode support and internationalization
|
2025-03-25 |
|
htslib
|
public |
No Summary
|
2025-03-25 |
|
tabix
|
public |
No Summary
|
2025-03-25 |
|
soapdenovo2
|
public |
Short read assembler specially designed for Illumina GA short reads
|
2025-03-25 |
|
blast
|
public |
No Summary
|
2025-03-25 |
|
oases
|
public |
De novo transcriptome assembler for very short reads
|
2025-03-25 |
|
velvet
|
public |
Sequence assembler for very short reads
|
2025-03-25 |
|
shrimp
|
public |
Package for mapping (short) reads to a reference genome
|
2025-03-25 |
|
hmmer
|
public |
Biosequence analysis using profile HMMs
|
2025-03-25 |
|
clustalw
|
public |
Multiple alignment of nucleic acid and protein sequences
|
2025-03-25 |
|
graphviz
|
public |
Graph Visualization Software
|
2025-03-25 |
|
libgd
|
public |
Library for the dynamic creation of images
|
2025-03-25 |
|
bfast
|
public |
Fast and accurate mapping of short reads to reference sequences
|
2025-03-25 |
|
bwa
|
public |
No Summary
|
2025-03-25 |
|
samtools
|
public |
No Summary
|
2025-03-25 |
|
plink
|
public |
Open-source whole genome association analysis toolset
|
2025-03-25 |
|
bowtie2
|
public |
No Summary
|
2025-03-25 |
|
bowtie
|
public |
Ultrafast, memory-efficient short read aligner
|
2025-03-25 |
|
bedtools
|
public |
Swiss-army knife of tools for a wide-range of genomics analysis tasks
|
2025-03-25 |
|
veclib-headers
|
public |
Vector intrinsics for IBM POWER architecture
|
2025-03-25 |
