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bfurneaux / packages / r-optimotu

OptimOTU calculates single-linkage clusters at multiple thresholds given a distance matrix, which may be sparse, using a fast, multithreaded C++ implementation. In particular, the memory requirements are small and fixed, and it can accept the distance matrix from a file or text connection, meaning that it can operate on very large matrices which do not fit in RAM. Routines for quickly counting the measure of the intersection of sorted sets, and for calculating the multiclass F-measure, are also included.

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Type Size Name Uploaded Downloads Labels
conda 619.5 kB | linux-64/r-optimotu-0.8.0-r43h3fd9d12_0.tar.bz2  1 month and 16 days ago 4 main
conda 591.3 kB | linux-64/r-optimotu-0.7.0-r43h3fd9d12_0.tar.bz2  2 months and 23 days ago 3 main
conda 576.2 kB | linux-64/r-optimotu-0.7.0-r42h3fd9d12_0.tar.bz2  2 months and 23 days ago 1 main
conda 351.7 kB | linux-64/r-optimotu-0.6.5-r42h3fd9d12_0.tar.bz2  1 year and 3 months ago 9 main
conda 351.6 kB | linux-64/r-optimotu-0.6.4-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 5 main
conda 351.7 kB | linux-64/r-optimotu-0.6.3-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 350.5 kB | linux-64/r-optimotu-0.6.2-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 351.1 kB | linux-64/r-optimotu-0.6.1.9004-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 360.1 kB | linux-64/r-optimotu-0.6.1.9003-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 359.7 kB | linux-64/r-optimotu-0.6.1.9001-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 359.8 kB | linux-64/r-optimotu-0.6.1.9000-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 3 main
conda 319.1 kB | linux-64/r-optimotu-0.6.1-r42h3fd9d12_0.tar.bz2  1 year and 4 months ago 4 main
conda 318.8 kB | linux-64/r-optimotu-0.6.1-r41h3fd9d12_0.tar.bz2  1 year and 4 months ago 2 main
conda 313.9 kB | linux-64/r-optimotu-0.6.0-r41h3fd9d12_0.tar.bz2  1 year and 5 months ago 2 main
conda 314.2 kB | linux-64/r-optimotu-0.6.0-r42h3fd9d12_0.tar.bz2  1 year and 5 months ago 3 main
conda 233.2 kB | linux-64/r-optimotu-0.5.1-r42h3fd9d12_0.tar.bz2  1 year and 5 months ago 1 main
conda 233.1 kB | linux-64/r-optimotu-0.5.1-r41h3fd9d12_0.tar.bz2  1 year and 5 months ago 2 main
conda 232.9 kB | linux-64/r-optimotu-0.5.1-r40h3fd9d12_0.tar.bz2  1 year and 5 months ago 3 main
conda 212.9 kB | linux-64/r-optimotu-0.4.4-r42h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 212.5 kB | linux-64/r-optimotu-0.4.4-r40h3fd9d12_0.tar.bz2  1 year and 7 months ago 6 main
conda 212.9 kB | linux-64/r-optimotu-0.4.3-r42h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 212.5 kB | linux-64/r-optimotu-0.4.3-r40h3fd9d12_0.tar.bz2  1 year and 7 months ago 3 main
conda 214.5 kB | linux-64/r-optimotu-0.4.2-r42h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 212.2 kB | linux-64/r-optimotu-0.4.2-r40h3fd9d12_0.tar.bz2  1 year and 7 months ago 3 main
conda 214.3 kB | linux-64/r-optimotu-0.4.1-r42h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 212.1 kB | linux-64/r-optimotu-0.4.1-r40h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 214.4 kB | linux-64/r-optimotu-0.4.0-r42h3fd9d12_0.tar.bz2  1 year and 7 months ago 2 main
conda 211.9 kB | linux-64/r-optimotu-0.4.0-r40h3fd9d12_0.tar.bz2  1 year and 7 months ago 5 main
conda 169.8 kB | linux-64/r-optimotu-0.3.0-r42h3fd9d12_0.tar.bz2  1 year and 8 months ago 3 main
conda 165.4 kB | linux-64/r-optimotu-0.2.5-r42h3fd9d12_0.tar.bz2  1 year and 8 months ago 3 main
conda 164.9 kB | linux-64/r-optimotu-0.2.4-r42h3fd9d12_0.tar.bz2  1 year and 9 months ago 3 main
conda 164.9 kB | linux-64/r-optimotu-0.2.3-r42h3fd9d12_0.tar.bz2  1 year and 9 months ago 3 main
conda 164.9 kB | linux-64/r-optimotu-0.2.2-r42h3fd9d12_0.tar.bz2  1 year and 9 months ago 3 main
conda 164.8 kB | linux-64/r-optimotu-0.2.1-r42h3fd9d12_0.tar.bz2  1 year and 9 months ago 3 main
conda 164.8 kB | linux-64/r-optimotu-0.2.0-r42h3fd9d12_0.tar.bz2  1 year and 9 months ago 4 main
conda 114.2 kB | linux-64/r-optimotu-0.1.0-r40h3fd9d12_0.tar.bz2  1 year and 10 months ago 8 main
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