dipwmsearch
Provides functions to search for any di-nucleotidic Position Weight Matrix (di-PWM) in a genomic sequence.
Installation
To install this package, run one of the following:
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Description
Package dipwmsearch
Description
This package provides efficient functions to search for one kind of probabilistic motifs known as di-nucleotidic Position Weight Matrices (di-PWMs) in a genomic sequence.
Documentation
A full documentation details how to install and use the package, and also provides ready-to-use scripts for searching a motif in FASTA sequence.
Please refer to: https://rivals.lirmm.net/dipwmsearch/
Contact: [email protected]
About
Summary
Provides functions to search for any di-nucleotidic Position Weight Matrix (di-PWM) in a genomic sequence.
Last Updated
Apr 15, 2023 at 07:55
License
CEA CNRS Inria Logiciel Libre License, version 2.1 (CeCILL-2.1)
Total Downloads
60
Supported Platforms
noarch
GitHub Repository
https://gite.lirmm.fr/rivals/dipwmsearchDocumentation
https://rivals.lirmm.net/dipwmsearch/