| Package Name | Access | Summary | Updated |
|---|---|---|---|
| versipy | public | Versatile version and medatada managment across the python packaging ecosystem with git integration | 2025-03-25 |
| pycosnake | public | pycoSnake is a neatly wrapped collection of snakemake workflows for analysing Illumina and nanopore sequencing datasets. It is easy to install with conda and simple to run on a local computer or in a cluster environment | 2025-03-25 |
| blastpy3 | public | Lightweight High level Python 3 API for NCBI BLAST | 2025-03-25 |
| nanocount | public | NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads | 2025-03-25 |
| pycometh | public | DNA methylation analysis for Oxford Nanopore DNA sequencing datasets downstream to Nanopolish | 2025-03-25 |
| pybiotools | public | pyBioTools is a collection of python tools to manipulate biological sequences | 2025-03-25 |
| pycoqc | public | PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data | 2025-03-25 |
