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r-descend

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DESCEND deconvolves the true gene expression distribution across cells for UMI scRNA-seq counts. It provides estimates of several distribution based statistics (five distribution measurements and the coefficients of covariates (such as batches or cell size)). Based on the estimation, DESCEND also can perform highly variable selection and differential testing of dispersion and burstiness measurements between two groups of cells with covariates adjustment.

Installation

To install this package, run one of the following:

Conda
$conda install aksarkar::r-descend

Usage Tracking

0.0.0.9000
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Downloads (Last 6 months): 0

About

Summary

DESCEND deconvolves the true gene expression distribution across cells for UMI scRNA-seq counts. It provides estimates of several distribution based statistics (five distribution measurements and the coefficients of covariates (such as batches or cell size)). Based on the estimation, DESCEND also can perform highly variable selection and differential testing of dispersion and burstiness measurements between two groups of cells with covariates adjustment.

Last Updated

Mar 15, 2019 at 02:50

License

GPL (>= 2)

Total Downloads

11

Supported Platforms

linux-64