agresearch
by AgResearch (Organization)
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To install packages from this channel, use the channel temporarily with conda or add it to your .condarc file for configured ongoing access. Learn more
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| arks | 1.0.4 | Scaffolding genome sequence assemblies using 10X Genomics GemCode/Chromium data. This is a new kmer-based (alignment free) implementation of ARCS. | Mar 25, 2025 | GPLv3 |
| ior | 3.1.0 | — | Mar 25, 2025 | — |
| iozone | 3.471 | — | Mar 25, 2025 | — |
| kojak | 2.0.0 | A database search algorithm for solving cross-linked peptide mass spectra. | Mar 25, 2025 | Apache-2.0 |
| meme | 4.11.2 | Motif based sequence Analysis tools | Mar 25, 2025 | Custom |
| rdkit-picalculax | Release_2017_09_2 | RDKit is a collection of cheminformatics and machine-learning software written in C++ and Python. This is a patched distribution to support pICalculax. | Mar 25, 2025 | BSD |
| scaff10x | 4.2 | Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads. | Mar 25, 2025 | MIT License |
| shapeit4 | 4.1.1 | fast and accurate method for estimation of haplotypes (phasing) | Mar 25, 2025 | MIT |