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Uploaded Thu Aug 7 22:39:17 2025
md5 checksum 1fd48816ba03fdefd5b8cf6da2d29065
arch x86_64
build py311_0
depends csvtk 0.34.0 h0d0c7ba_0, nextalign 2.14.0 h9ee0642_2, nextclade 3.16.0 h9ee0642_0, nextclade2 2.14.0 h9ee0642_2, seqkit 2.10.0 he881be0_1, _libgcc_mutex 0.1 conda_forge, ca-certificates 2025.8.3 hbd8a1cb_0, ld_impl_linux-64 2.44 h1423503_1, libgomp 15.1.0 h767d61c_4, python_abi 3.11 8_cp311, tzdata 2025b h78e105d_0, _openmp_mutex 4.5 2_gnu, ncbi-datasets-cli 18.5.1 ha770c72_0, libgcc 15.1.0 h767d61c_4, aws-c-common 0.12.4 hb03c661_0, c-ares 1.34.5 hb9d3cd8_0, gzip 1.14 hb9d3cd8_0, libbrotlicommon 1.1.0 hb9d3cd8_3, libdeflate 1.24 h86f0d12_0, libexpat 2.7.1 hecca717_0, libffi 3.4.6 h2dba641_1, libgcc-ng 15.1.0 h69a702a_4, libgfortran5 15.1.0 hcea5267_4, libiconv 1.18 h4ce23a2_1, libjpeg-turbo 3.1.0 hb9d3cd8_0, liblzma 5.8.1 hb9d3cd8_2, libnsl 2.0.1 hb9d3cd8_1, libstdcxx 15.1.0 h8f9b012_4, libuv 1.51.0 hb03c661_1, libwebp-base 1.6.0 hd42ef1d_0, libzlib 1.3.1 hb9d3cd8_2, ncurses 6.5 h2d0b736_3, oniguruma 6.9.10 hb9d3cd8_0, openssl 3.5.2 h26f9b46_0, pthread-stubs 0.4 hb9d3cd8_1002, sed 4.9 h6688a6e_0, tsv-utils 2.2.3 hd68e0f1_8, xorg-libxau 1.0.12 hb9d3cd8_0, xorg-libxdmcp 1.1.5 hb9d3cd8_0, yaml 0.2.5 h280c20c_3, aws-c-cal 0.9.2 he7b75e1_1, aws-c-compression 0.3.1 h92c474e_6, aws-c-sdkutils 0.2.4 h92c474e_1, aws-checksums 0.2.7 h92c474e_2, bzip2 1.0.8 h4bc722e_7, coreutils 9.5 hd590300_0, iqtree 2.4.0 h503566f_0, jq 1.8.1 h73b1eb8_0, keyutils 1.6.1 h166bdaf_0, lerc 4.0.0 h0aef613_1, libabseil 20240722.0 cxx17_hbbce691_4, libasprintf 0.25.1 h3f43e3d_1, libbrotlidec 1.1.0 hb9d3cd8_3, libbrotlienc 1.1.0 hb9d3cd8_3, libedit 3.1.20250104 pl5321h7949ede_0, libev 4.33 hd590300_2, libgettextpo 0.25.1 h3f43e3d_1, libgfortran 15.1.0 h69a702a_4, liblzma-devel 5.8.1 hb9d3cd8_2, libpng 1.6.50 h421ea60_1, libsqlite 3.50.4 h0c1763c_0, libssh2 1.11.1 hcf80075_0, libstdcxx-ng 15.1.0 h4852527_4, libunistring 0.9.10 h7f98852_0, libuuid 2.38.1 h0b41bf4_0, libxcb 1.17.0 h8a09558_0, libxcrypt 4.4.36 hd590300_1, readline 8.2 h8c095d6_2, s2n 1.5.23 h8e187f5_0, tar 1.35 h3b78370_0, tk 8.6.13 noxft_hd72426e_102, unzip 6.0 h7f98852_3, xz-gpl-tools 5.8.1 hbcc6ac9_2, xz-tools 5.8.1 hb9d3cd8_2, zip 3.0 hd590300_3, zlib 1.3.1 hb9d3cd8_2, zstd 1.5.7 hb8e6e7a_2, aws-c-io 0.21.2 h6252d9a_1, bash 5.2.37 h4be8908_0, brotli-bin 1.1.0 hb9d3cd8_3, gdbm 1.18 h0a1914f_2, gmp 6.3.0 hac33072_2, icu 73.2 h59595ed_0, krb5 1.21.3 h659f571_0, libfreetype6 2.13.3 h48d6fc4_1, libidn2 2.3.8 ha4ef2c3_0, libllvm14 14.0.6 hcd5def8_4, libnghttp2 1.64.0 h161d5f1_0, libopenblas 0.3.30 pthreads_h94d23a6_1, libprotobuf 5.28.3 h6128344_1, libre2-11 2024.07.02 hbbce691_2, libtiff 4.7.0 hf01ce69_5, pcre2 10.44 hc749103_2, perl 5.32.1 7_hd590300_perl5, python 3.11.13 h9e4cc4f_0_cpython, qhull 2020.2 h434a139_5, sqlite 3.50.4 hbc0de68_0, xz 5.8.1 hbcc6ac9_2, absl-py 2.3.1 pyhd8ed1ab_0, aiohappyeyeballs 2.6.1 pyhd8ed1ab_0, appdirs 1.4.4 pyhd8ed1ab_1, argparse-dataclass 2.0.0 pyhd8ed1ab_0, attrs 25.3.0 pyh71513ae_0, aws-c-event-stream 0.5.5 h149bd38_3, aws-c-http 0.10.4 h37a7233_0, blinker 1.9.0 pyhff2d567_0, bracex 2.2.1 pyhd8ed1ab_0, brotli 1.1.0 hb9d3cd8_3, brotli-python 1.1.0 py311hfdbb021_3, cachetools 6.1.0 pyhd8ed1ab_0, certifi 2025.8.3 pyhd8ed1ab_0, charset-normalizer 3.4.2 pyhd8ed1ab_0, colorama 0.4.6 pyhd8ed1ab_1, configargparse 1.7.1 pyhe01879c_0, connection_pool 0.0.3 pyhd3deb0d_0, cycler 0.12.1 pyhd8ed1ab_1, distro 1.8.0 pyhd8ed1ab_0, docutils 0.19 py311h38be061_1, dpath 2.2.0 pyha770c72_0, epiweeks 2.3.0 pyhdfd78af_0, fasteners 0.19 pyhd8ed1ab_1, fastprogress 1.0.3 pyhd8ed1ab_1, frozendict 2.4.6 py311h9ecbd09_0, frozenlist 1.7.0 py311h52bc045_0, fsspec 2025.7.0 pyhd8ed1ab_0, grep 3.11 h7af0fdc_3, hpack 4.1.0 pyhd8ed1ab_0, humanfriendly 10.0 pyh707e725_8, hyperframe 6.1.0 pyhd8ed1ab_0, idna 3.10 pyhd8ed1ab_1, immutables 0.21 py311h9ecbd09_1, iniconfig 2.0.0 pyhd8ed1ab_1, jmespath 1.0.1 pyhd8ed1ab_1, kiwisolver 1.4.8 py311hd18a35c_1, lcms2 2.17 h717163a_0, libblas 3.9.0 33_h59b9bed_openblas, libcurl 8.14.1 h332b0f4_0, libfreetype 2.13.3 ha770c72_1, libxml2 2.12.7 h4c95cb1_3, llvmlite 0.41.1 py311ha6695c7_0, logmuse 0.2.8 pyhd8ed1ab_1, markupsafe 3.0.2 py311h2dc5d0c_1, mdurl 0.1.2 pyhd8ed1ab_1, mpfr 4.2.1 h90cbb55_3, multidict 6.6.3 py311h2dc5d0c_0, munkres 1.1.4 pyhd8ed1ab_1, nodejs 22.6.0 h6d9b948_0, openjpeg 2.5.3 h55fea9a_1, opt_einsum 3.4.0 pyhd8ed1ab_1, packaging 25.0 pyh29332c3_1, pango_aliasor 0.3.0 pyhdfd78af_0, plac 1.4.5 pyhd8ed1ab_0, platformdirs 4.3.8 pyhe01879c_0, pluggy 1.6.0 pyhd8ed1ab_0, propcache 0.3.1 py311h2dc5d0c_0, psutil 7.0.0 py311h9ecbd09_0, pycparser 2.22 pyh29332c3_1, pygments 2.19.2 pyhd8ed1ab_0, pyjwt 2.10.1 pyhd8ed1ab_0, pyparsing 3.2.3 pyhe01879c_2, pysocks 1.7.1 pyha55dd90_7, python-fastjsonschema 2.21.1 pyhd8ed1ab_0, pytz 2025.2 pyhd8ed1ab_0, pyyaml 6.0.2 py311h2dc5d0c_2, re2 2024.07.02 h9925aae_2, reretry 0.11.8 pyhd8ed1ab_1, rpds-py 0.27.0 py311h902ca64_0, ruamel.yaml.clib 0.2.8 py311h9ecbd09_1, ruby 3.4.5 hd8161a3_0, setuptools 80.9.0 pyhff2d567_0, six 1.17.0 pyhe01879c_1, slack-sdk 3.36.0 pyhd8ed1ab_0, smmap 5.0.2 pyhd8ed1ab_0, sniffio 1.3.1 pyhd8ed1ab_1, tabulate 0.9.0 pyhd8ed1ab_2, threadpoolctl 3.6.0 pyhecae5ae_0, throttler 1.2.2 pyhd8ed1ab_0, tomli 2.2.1 pyhe01879c_2, traitlets 5.14.3 pyhd8ed1ab_1, typing_extensions 4.14.1 pyhe01879c_0, unicodedata2 16.0.0 py311h9ecbd09_0, wcwidth 0.2.13 pyhd8ed1ab_1, wget 1.21.4 hda4d442_0, wheel 0.45.1 pyhd8ed1ab_1, wrapt 1.17.2 py311h9ecbd09_0, xlrd 2.0.1 pyhd8ed1ab_3, zipp 3.23.0 pyhd8ed1ab_0, aioitertools 0.12.0 pyhd8ed1ab_1, aiosignal 1.4.0 pyhd8ed1ab_0, amply 0.1.6 pyhd8ed1ab_1, auspice 2.63.0 h9aeec6d_0, aws-c-auth 0.9.0 h0fbd49f_19, aws-c-mqtt 0.13.3 h19deb91_3, cffi 1.17.1 py311hf29c0ef_0, conda-inject 1.3.2 pyhd8ed1ab_0, curl 8.14.1 h332b0f4_0, exceptiongroup 1.3.0 pyhd8ed1ab_0, fonttools 4.59.0 py311h3778330_0, freetype 2.13.3 ha770c72_1, gawk 5.3.1 hcd3d067_0, git 2.49.0 pl5321h59d505e_0, gitdb 4.0.12 pyhd8ed1ab_0, h11 0.16.0 pyhd8ed1ab_0, h2 4.2.0 pyhd8ed1ab_0, importlib-metadata 8.7.0 pyhe01879c_1, jinja2 3.1.6 pyhd8ed1ab_0, joblib 1.5.1 pyhd8ed1ab_0, jupyter_core 5.8.1 pyh31011fe_0, libcblas 3.9.0 33_he106b2a_openblas, libgrpc 1.67.1 h25350d4_2, libhwloc 2.11.2 default_he43201b_1000, liblapack 3.9.0 33_h7ac8fdf_openblas, libxslt 1.1.39 h76b75d6_0, markdown-it-py 3.0.0 pyhd8ed1ab_1, multipledispatch 0.6.0 pyhd8ed1ab_1, pillow 11.3.0 py311h1322bbf_0, pip 25.2 pyh8b19718_0, prompt-toolkit 3.0.51 pyha770c72_0, python-dateutil 2.9.0 pyhd8ed1ab_0, referencing 0.36.2 pyh29332c3_0, ruamel.yaml 0.17.21 py311h2582759_3, slack_sdk 3.36.0 hd8ed1ab_0, smart_open 7.3.0.post1 pyhe01879c_0, snakemake-interface-common 1.21.0 pyhdfd78af_0, tqdm 4.67.1 pyhd8ed1ab_1, urllib3 1.26.19 pyhd8ed1ab_0, wcmatch 10.1 pyhd8ed1ab_0, yarl 1.20.1 py311h2dc5d0c_0, yte 1.8.1 pyha770c72_0, aiohttp 3.12.15 py311h3778330_0, anyio 4.10.0 pyhe01879c_0, aws-c-s3 0.8.6 h800fcd2_2, botocore 1.39.8 pyge310_1234567_0, cryptography 45.0.6 py311h8488d03_0, gitpython 3.1.45 pyhff2d567_0, jsonschema-specifications 2025.4.1 pyh29332c3_0, liblapacke 3.9.0 33_he2f377e_openblas, lxml 5.3.0 py311hcfaa980_2, numpy 1.26.4 py311h64a7726_0, pytest 8.4.1 pyhd8ed1ab_0, requests 2.32.4 pyhd8ed1ab_0, rich 14.1.0 pyhe01879c_0, snakemake-interface-executor-plugins 9.3.9 pyhdfd78af_0, snakemake-interface-logger-plugins 1.2.4 pyhdfd78af_0, snakemake-interface-report-plugins 1.2.0 pyhdfd78af_0, snakemake-interface-storage-plugins 4.2.2 pyhdfd78af_0, tbb 2022.1.0 h4ce085d_0, aiobotocore 2.23.2 pyhe01879c_1, awscrt 0.27.5 py311h461371f_0, biopython 1.85 py311h9ecbd09_1, coin-or-utils 2.11.12 h93d2bc8_5, contourpy 1.3.3 py311hdf67eae_1, gprofiler-official 1.0.0 pyh7e72e81_1, httpcore 1.0.9 pyh29332c3_0, jsonschema 4.25.0 pyhe01879c_0, ml_dtypes 0.5.1 py311h7db5c69_0, numba 0.58.1 py311h96b013e_0, oauthlib 3.3.1 pyhd8ed1ab_0, pandas 1.5.3 py311h2872171_1, pooch 1.8.2 pyhd8ed1ab_2, pyld 2.0.4 pyhd8ed1ab_1, s3transfer 0.13.1 pyhd8ed1ab_0, scipy 1.16.0 py311h2d3ef60_0, veracitools 0.1.3 py_0, awscli 2.28.4 py311h38be061_0, boto3 1.39.8 pyhd8ed1ab_0, coin-or-osi 0.108.11 hf4fecb4_7, httpx 0.28.1 pyhd8ed1ab_0, jaxlib 0.4.38 cpu_py311h7471791_0, matplotlib-base 3.10.5 py311h0f3be63_0, nbformat 5.10.4 pyhd8ed1ab_1, requests-oauthlib 1.4.0 pyhd8ed1ab_0, s3fs 2025.7.0 pyhd8ed1ab_0, scikit-learn 1.4.2 py311he08f58d_1, ubiquerg 0.8.0 pyhd8ed1ab_0, attmap 0.13.2 pyhd8ed1ab_0, biothings_client 0.4.1 pyh29332c3_0, coin-or-clp 1.17.10 hc03379b_3, hdbscan 0.8.39 py311h9f3472d_0, jax 0.4.38 pyhd8ed1ab_0, nextstrain-cli 9.0.0 pyhdfd78af_0, pynndescent 0.5.13 pyhd8ed1ab_1, seaborn-base 0.13.2 pyhd8ed1ab_3, snakemake-storage-plugin-http 0.3.0 pyhdfd78af_0, snakemake-storage-plugin-s3 0.3.4 pyhdfd78af_0, coin-or-cgl 0.60.9 hc46dffc_6, jaxopt 0.8.4 pyhd8ed1ab_0, mygene 3.2.2 pyh5e36f6f_0, numpyro 0.13.2 pyhd8ed1ab_1, peppy 0.40.7 pyhd8ed1ab_0, umap-learn 0.5.9.post2 py311h38be061_0, bio 1.8.0 pyhdfd78af_0, blackjax 0.9.6 pyhd8ed1ab_0, coin-or-cbc 2.10.12 h4d16d09_4, eido 0.2.4 pyhd8ed1ab_0, pathogen-embed 3.1.0 pyhdfd78af_0, evofr 0.1.27 pyhdfd78af_0, pulp 2.8.0 py311h77a8cca_2, snakemake-minimal 9.9.0 pyhdfd78af_0, snakemake 9.9.0 hdfd78af_0
has_prefix True
license The license for this meta-package is MIT; individual tools vary.
machine x86_64
operatingsystem linux
platform linux
subdir linux-64
target-triplet x86_64-any-linux
timestamp 1754605802553